Topic: Algorithms

Journal: Journal of Computational Biology : a Journal of Computational Molecular Cell Biology

Documents

A list of abstracts that contain a topic of "Algorithms" and a journal name of "Journal of Computational Biology : a Journal of Computational Molecular Cell Biology".

• Modular Dag-rnn Architectures for Assembling Coarse Protein Structures.

  PMID: 16706716

• Bayesian Haplotype Inference Via the Dirichlet Process.

  PMID: 17563311

• A Polynomial Time Solvable Formulation of Multiple Sequence Alignment.

  PMID: 16597242

• Fjoin: Simple and Efficient Computation of Feature Overlaps.

  PMID: 17061921

• Alignment of Optical Maps.

  PMID: 16597251

• A Reversible Jump Markov Chain Monte Carlo Algorithm for Bacterial Promoter Motifs Discovery.

  PMID: 16706717

• Exact and Approximation Algorithms for Dna Tag Set Design.

  PMID: 16706722

• A Pseudo-boolean Framework for Computing Rearrangement Distances Between Genomes with Duplicates.

  PMID: 17572018

• A Reduction-based Exact Algorithm for the Contact Map Overlap Problem.

  PMID: 17683265

• Exploiting Interactions Among Polymorphisms Contributing to Complex Disease Traits with Boosted Generative Modeling.

  PMID: 17238838

• Binary State Pattern Clustering: a Digital Paradigm for Class and Biomarker Discovery in Gene Microarray Studies of Cancer.

  PMID: 16796554

• A Compression-based Approach for Coding Sequences Identification. I. Application to Prokaryotic Genomes.

  PMID: 17061923

• Algorithmic Computation of Knot Polynomials of Secondary Structure Elements of Proteins.

  PMID: 17061925

• A Dynamic Programming Approach for Finding Common Patterns in Rnas.

  PMID: 17381344

• De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning.

  PMID: 16597246

• Finding Motifs in Protein Secondary Structure for Use in Function Prediction.

  PMID: 16706721

• Gapped Permutation Pattern Discovery for Gene Order Comparisons.

  PMID: 17381345

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