Topic: Binding Sites

Journal: Biochemistry

Documents

A list of abstracts that contain a topic of "Binding Sites" and a journal name of "Biochemistry".

• Characterization of the Heme Binding Properties of Staphylococcus Aureus Isda.

  PMID: 17042505

• Chea Kinase of Bacterial Chemotaxis: Chemical Mapping of Four Essential Docking Sites.

  PMID: 16846213

• Water in the Active Site of an All-rna Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.

  PMID: 16411744

• Modification of the Phylloquinone in the A1 Binding Site in Photosystem I Studied Using Time-resolved Ftir Difference Spectroscopy and Density Functional Theory.

  PMID: 16566585

• Alternative Pathways for Radical Dissipation in an Active Site Mutant of B12-dependent Methylmalonyl-coa Mutase.

  PMID: 16503649

• Assignment of the Zinc Ligands in Rsra, a Redox-sensing Zas Protein from Streptomyces Coelicolor.

  PMID: 16819828

• Phosphate Analogues As Probes of the Catalytic Mechanisms of Mura and Aroa, Two Carboxyvinyl Transferases.

  PMID: 16681375

• The Role of the Dna-binding Domains in Cooa Activation.

  PMID: 16752905

• Mechanism of Flavin Reduction in Class 2 Dihydroorotate Dehydrogenases.

  PMID: 17154530

• Structural Diversity Within the Mononuclear and Binuclear Active Sites of N-acetyl-d-glucosamine-6-phosphate Deacetylase.

  PMID: 17567048

• Kinetic and Structural Evidence for the Importance of Tyr236 for the Integrity of the Mo Active Site in a Bacterial Sulfite Dehydrogenase.

  PMID: 16893171

• Analysis of Hiv-1 Crf_01 A/E Protease Inhibitor Resistance: Structural Determinants for Maintaining Sensitivity and Developing Resistance to Atazanavir.

  PMID: 16634628

• Kinetic Mechanism of Ligand Binding in Human Ileal Bile Acid Binding Protein As Determined by Stopped-flow Fluorescence Analysis.

  PMID: 17432832

• Mechanisms of Discrimination Between Cobalamins and Their Natural Analogues During Their Binding to the Specific B12-transporting Proteins.

  PMID: 17487979

• Structural Characterization of Human Rpa Sequential Binding to Single-stranded Dna Using Ssdna As a Molecular Ruler.

  PMID: 17583916

• Signal Peptide Peptidase: Biochemical Properties and Modulation by Nonsteroidal Antiinflammatory Drugs.

  PMID: 16834339

• Amino Acid Residues His183 and Glu264 in Bacillus Subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin Ix.

  PMID: 17198378

• Insights into Cu(I) Exchange in Hah1 Using Quantum Mechanical and Molecular Simulations.

  PMID: 17616150

• Metal Ion Substitution in the Catalytic Site Greatly Affects the Binding of Sulfhydryl-containing Compounds to Leucyl Aminopeptidase.

  PMID: 16519517

• Diverse Functional Motifs Within the Three Intracellular Loops of the Cgrp1 Receptor.

  PMID: 17059214

• Simulating the Effect of Dna Polymerase Mutations on Transition-state Energetics and Fidelity: Evaluating Amino Acid Group Contribution and Allosteric Coupling for Ionized Residues in Human Pol Beta.

  PMID: 16752894

• Phenylalanyl-trna Synthetase Contains a Dispensable Rna-binding Domain That Contributes to the Editing of Noncognate Aminoacyl-trna.

  PMID: 16866361

• Cooperative Inhibition of Human Thymidylate Synthase by Mixtures of Active Site Binding and Allosteric Inhibitors.

  PMID: 17297914

• The Escherichia Coli Pria Helicase Has Two Nucleotide-binding Sites Differing Dramatically in Their Affinities for Nucleotide Cofactors. 1. Intrinsic Affinities, Cooperativities, and Base Specificity of Nucleotide Cofactor Binding.

  PMID: 16752911

• Proteolytic Fragments of Insulysin (Ide) Retain Substrate Binding but Lose Allosteric Regulation.

  PMID: 17154546

• Peptide Binding by a Fragment of Calmodulin Composed of Ef-hands 2 and 3.

  PMID: 17595060

• Anthrax Lethal Factor (Lf) Mediated Block of the Anthrax Protective Antigen (Pa) Ion Channel: Effect of Ionic Strength and Voltage.

  PMID: 16503661

• One Functional Switch Mediates Reversible and Irreversible Inactivation of a Herpesvirus Protease.

  PMID: 16533039

• Recognition and Discrimination of Gases by the Oxygen-sensing Signal Transducer Protein Hemat As Revealed by Ftir Spectroscopy.

  PMID: 16784227

• Interaction of Ascorbate Peroxidase with Substrates: a Mechanistic and Structural Analysis.

  PMID: 16784232

• Structure and Mutational Analysis of the Phon Protein of Salmonella Typhimurium Provide Insight into Mechanistic Details.

  PMID: 17263560

• Active Site of Epoxide Hydrolases Revisited: a Noncanonical Residue in Potato Steh1 Promotes Both Formation and Breakdown of the Alkylenzyme Intermediate.

  PMID: 17284015

• Mechanistic and Structural Studies of H373q Flavocytochrome B2: Effects of Mutating the Active Site Base.

  PMID: 17563122

• Simulated Interactions Between Angiotensin-converting Enzyme and Substrate Gonadotropin-releasing Hormone: Novel Insights into Domain Selectivity.

  PMID: 17605472

• Carboxy-terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases.

  PMID: 17661446

• Structural Basis for the Role of Asp-120 in Metallo-beta-lactamases.

  PMID: 17715946

• Bilayer Mechanical Properties Regulate the Transmembrane Helix Mobility and Enzymatic State of Cd39.

  PMID: 17198399

• Direct Kinetic Evidence for Half-of-the-sites Reactivity in the E1 Component of the Human Pyruvate Dehydrogenase Multienzyme Complex Through Alternating Sites Cofactor Activation.

  PMID: 17042496

• Solution Nmr of Large Molecules and Assemblies.

  PMID: 17209543

• Mechanistic Diversity in the Rubisco Superfamily: the "Enolase" in the Methionine Salvage Pathway in Geobacillus Kaustophilus.

  PMID: 17352497

• Comparative Kinetics of Cofactor Association and Dissociation for the Human and Trypanosomal S-adenosylhomocysteine Hydrolases. 1. Basic Features of the Association and Dissociation Processes.

  PMID: 17447732

• Periplasmic Metal-resistance Protein Cusf Exhibits High Affinity and Specificity for Both Cui and Agi.

  PMID: 16964970

• Thermodynamics of Phosphopeptide Binding to the Human Peptidyl Prolyl Cis/Trans Isomerase Pin1.

  PMID: 17002312

• Implications for an Ionized Alkyl-enzyme Intermediate During Steh1-catalyzed Trans-stilbene Oxide Hydrolysis.

  PMID: 16388596

• Structure and Dynamics of the Hiv-1 Vpu Transmembrane Domain Revealed by Solid-state Nmr with Magic-angle Spinning.

  PMID: 16411768

• Binding of Polyaminocarboxylate Chelators to the Active-site Copper Inhibits the Gsno-reductase Activity but Not the Superoxide Dismutase Activity of Cu,zn-superoxide Dismutase.

  PMID: 17042490

• Reduction of the Pea Ferredoxin-nadp(H) Reductase Catalytic Efficiency by the Structuring of a Carboxyl-terminal Artificial Metal Binding Site.

  PMID: 17105208

• Absence of Substrate Channeling Between Active Sites in the Agrobacterium Tumefaciens Ispdf and Ispe Enzymes of the Methyl Erythritol Phosphate Pathway.

  PMID: 16533036

• Discovery, Synthesis, and Structure Activity of a Highly Selective Alpha7 Nicotinic Acetylcholine Receptor Antagonist.

  PMID: 17497892

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