Topic: Binding Sites

Journal: Proteins

Documents

A list of abstracts that contain a topic of "Binding Sites" and a journal name of "Proteins".

Eadock: Docking of Small Molecules into Protein Active Sites with a Multiobjective Evolutionary Optimization.

PMID: 17380512
Psi-dock: Towards Highly Efficient and Accurate Flexible Ligand Docking.

PMID: 16395666
Crystal Structure of Phosphatidylglycerophosphatase (Pgpase), a Putative Membrane-bound Lipid Phosphatase, Reveals a Novel Binuclear Metal Binding Site and Two "Proton Wires".

PMID: 16838328
Towards the Molecular Understanding of Glycogen Elongation by Amylosucrase.

PMID: 17044042
Modeling Truncated Hemoglobin Vibrational Dynamics.

PMID: 16315240
Molecular Dynamics Simulations of Lysrs: an Asymmetric State.

PMID: 16317719
Using Evolutionary and Structural Information to Predict Dna-binding Sites on Dna-binding Proteins.

PMID: 16568445
Rosettaligand: Protein-small Molecule Docking with Full Side-chain Flexibility.

PMID: 16972285
Dynamics and Assembly of the Cytolethal Distending Toxin.

PMID: 17034038
Computational Approach to Site-directed Ligand Discovery.

PMID: 17444517
Role of Disulfide Bonds in Modulating Internal Motions of Proteins to Tune Their Function: Molecular Dynamics Simulation of Scorpion Toxin Lqh Iii.

PMID: 16400645
Homology Modeling and Molecular Dynamics Simulations of the Glycine Receptor Ligand Binding Domain.

PMID: 17357155
Cancer-related Mutations in Brca1-brct Cause Long-range Structural Changes in Protein-protein Binding Sites: a Molecular Dynamics Study.

PMID: 17063491
Influence of the Protein Matrix on Intramolecular Histidine Ligation in Ferric and Ferrous Hexacoordinate Hemoglobins.

PMID: 17044063
Prediction of Protein Stability Changes for Single-site Mutations Using Support Vector Machines.

PMID: 16372356
A Chemogenomic Analysis of the Transmembrane Binding Cavity of Human G-protein-coupled Receptors.

PMID: 16294340
Disulfide Connectivity Prediction with 70% Accuracy Using Two-level Models.

PMID: 16615141
Specific Dna Binding by the Homeodomain Nkx2.5(C56s): Detection of Impaired Dna or Unfolded Protein by Isothermal Titration Calorimetry.

PMID: 16555308
Locating the Active Sites of Enzymes Using Mechanical Properties.

PMID: 17311346
Divalent Ion-binding Properties of the Two Avian Beta-parvalbumins.

PMID: 16283654
Methyl Dynamics for Understanding Hydrophobic Core Packing of Dynamically Different Motifs of Double-stranded Rna Binding Domain of Protein Kinase R.

PMID: 16299777

Medical Journals

Topic: Binding Sites

Journal: Proteins

Documents

Eadock: Docking of Small Molecules into Protein Active Sites with a Multiobjective Evolutionary Optimization.

Psi-dock: Towards Highly Efficient and Accurate Flexible Ligand Docking.

Crystal Structure of Phosphatidylglycerophosphatase (Pgpase), a Putative Membrane-bound Lipid Phosphatase, Reveals a Novel Binuclear Metal Binding Site and Two "Proton Wires".

Towards the Molecular Understanding of Glycogen Elongation by Amylosucrase.

Modeling Truncated Hemoglobin Vibrational Dynamics.

Molecular Dynamics Simulations of Lysrs: an Asymmetric State.

Using Evolutionary and Structural Information to Predict Dna-binding Sites on Dna-binding Proteins.

Rosettaligand: Protein-small Molecule Docking with Full Side-chain Flexibility.

Dynamics and Assembly of the Cytolethal Distending Toxin.

Computational Approach to Site-directed Ligand Discovery.

Role of Disulfide Bonds in Modulating Internal Motions of Proteins to Tune Their Function: Molecular Dynamics Simulation of Scorpion Toxin Lqh Iii.

Homology Modeling and Molecular Dynamics Simulations of the Glycine Receptor Ligand Binding Domain.

Cancer-related Mutations in Brca1-brct Cause Long-range Structural Changes in Protein-protein Binding Sites: a Molecular Dynamics Study.

Influence of the Protein Matrix on Intramolecular Histidine Ligation in Ferric and Ferrous Hexacoordinate Hemoglobins.

Prediction of Protein Stability Changes for Single-site Mutations Using Support Vector Machines.

A Chemogenomic Analysis of the Transmembrane Binding Cavity of Human G-protein-coupled Receptors.

Disulfide Connectivity Prediction with 70% Accuracy Using Two-level Models.

Specific Dna Binding by the Homeodomain Nkx2.5(C56s): Detection of Impaired Dna or Unfolded Protein by Isothermal Titration Calorimetry.

Locating the Active Sites of Enzymes Using Mechanical Properties.

Divalent Ion-binding Properties of the Two Avian Beta-parvalbumins.

Methyl Dynamics for Understanding Hydrophobic Core Packing of Dynamically Different Motifs of Double-stranded Rna Binding Domain of Protein Kinase R.

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